annaffy

Annotation tools for Affymetrix biological metadata

Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.

Author	Colin A. Smith
Maintainer	Colin A. Smith

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("annaffy")

Vignettes (Documentation)

Package Downloads

annaffy.pdf

Source	annaffy_1.12.1.tar.gz
Windows binary	annaffy_1.12.1.zip
OS X binary	annaffy_1.12.1.tgz

Details

biocViews	OneChannel , Microarray , Annotation , GO , Pathways , ReportWriting
Depends	R, methods, Biobase, GO.db, KEGG.db
Suggests	hgu95av2.db, multtest, tcltk
Imports	AnnotationDbi
SystemRequirements
License	LGPL
URL
dependsOnMe	affycoretools, stam, webbioc
suggestsMe	AffyExpress, BiocCaseStudies, maDB, oneChannelGUI