matchprobes

Basic infrastructure for using oligonucleotide microarray reporter sequence information for preprocessing and quality assessment

For general work with genomic sequences, this package is inadequate. Please refer to the Biostrings package for that.

Author Robert Gentleman, Wolfgang Huber
Maintainer Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("matchprobes")

Vignettes (Documentation)

Package Downloads
matchprobes.pdf
Source matchprobes_1.12.1.tar.gz
Windows binary matchprobes_1.12.1.zip
OS X binary matchprobes_1.12.1.tgz

Details

biocViews
Microarray , Annotation
Depends R, Biobase, affy
Suggests hgu95av2cdf, hgu95av2probe, hu6800cdf, hu6800probe
Imports
SystemRequirements
License Artistic-2.0
URL
dependsOnMe altcdfenvs, gcrma
suggestsMe BiocCaseStudies, ecolitk