safe
Significance Analysis of Function and Expression
SAFE is a resampling-based method for testing functional
categories is gene expression experiments. SAFE can be applied
to 2-sample and multi-class comparisons, or simple linear
regressions. Other experimental designs can also be
accommodated through user-defined functions.
Author |
William T. Barry |
Maintainer |
William T. Barry |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("safe")
Vignettes (Documentation)
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Package Downloads
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Details
biocViews |
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Depends |
R, SparseM, GO, annotate, Biobase |
Suggests |
GOstats, Rgraphviz, multtest, hu6800, survival |
Imports |
GO, annotate, survival, Biobase |
SystemRequirements |
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License |
GPL version 2 or newer |
URL |
http://www.duke.edu/~dinbarry/SAFE/
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dependsOnMe |
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suggestsMe |
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