# A Thin Wrapper around the ImmuneSpace Database

## Documentation for package ‘ImmuneSpaceR’ version 1.21.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

ImmuneSpaceR-package | A Thin Wrapper Around ImmuneSpace
addTreatmentt | The ImmuneSpaceConnection class
check_netrc | Check netrc file
CreateConnection | CreateConnection
getDataset | The ImmuneSpaceConnection class
getGEAnalysis | The ImmuneSpaceConnection class
getGEFiles | The ImmuneSpaceConnection class
getGEInputs | The ImmuneSpaceConnection class
getGEMatrix | The ImmuneSpaceConnection class
getParticipantData | The ImmuneSpaceConnection class
getParticipantGEMatrix | The ImmuneSpaceConnection class
ImmuneSpaceConnection | The ImmuneSpaceConnection class
ImmuneSpaceR | A Thin Wrapper Around ImmuneSpace
interactive_netrc | Interactively write a netrc file
ISCon | The ImmuneSpaceConnection class
ISpalette | ImmuneSpace palette
listDatasets | The ImmuneSpaceConnection class
listGatingSets | The ImmuneSpaceConnection class
listGEAnalysis | The ImmuneSpaceConnection class
listGEMatrices | The ImmuneSpaceConnection class
listParticipantGroups | The ImmuneSpaceConnection class
listParticipantMatrices | The ImmuneSpaceConnection class
listWorkspaces | The ImmuneSpaceConnection class
loadConnection | Save/Load an ImmuneSpaceConnection object from disk
loadGatingSet | The ImmuneSpaceConnection class
mapSampleNames | The ImmuneSpaceConnection class
saveConnection | Save/Load an ImmuneSpaceConnection object from disk
summarizeCyto | The ImmuneSpaceConnection class
summarizeGatingSet | The ImmuneSpaceConnection class
template_IS | template_IS
theme_IS | theme_IS
write_netrc | Write a netrc file