# Parsing GenBank files into semantically useful objects

## Documentation for package ‘genbankr’ version 1.21.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

accession | genbankr specific api
accession,GenBankRecord | genbankr specific api
accession-method | genbankr specific api
cds-method | Annotation extraction api
cdsBy,GenBankRecord | Annotation extraction api
cdsBy-method | Annotation extraction api
definition | genbankr specific api
definition,GenBankRecord | genbankr specific api
definition-method | genbankr specific api
exons-method | Annotation extraction api
exonsBy,GenBankRecord | Annotation extraction api
exonsBy-method | Annotation extraction api
GBAccession | GBAccession ID class
GBAccession-class | GBAccession ID class
GBFile-class | GenBank File
gbk-specific-api | genbankr specific api
GBKFile-class | GenBank File
GenBankFile | GenBank File
GenBankFile-class | GenBank File
GenBankRecord-class | GenBank data objects
genes-method | Annotation extraction api
getSeq-method | Annotation extraction api
import,GenBankFile | Import genbank file
import-method | Import genbank file
intergenic | Extract intergenic regions from processed GenBank annotations
intergenic-method | Extract intergenic regions from processed GenBank annotations
isCircular,GenBankRecord | Annotation extraction api
isCircular-method | Annotation extraction api
locus | genbankr specific api
locus,GenBankRecord | genbankr specific api
locus-method | genbankr specific api
makeTxDbFromGenBank | Create a TxDb from a GenBank record
makeTxDbFromGenBank,GBAccession | Create a TxDb from a GenBank record
makeTxDbFromGenBank,GenBankRecord | Create a TxDb from a GenBank record
makeTxDbFromGenBank-method | Create a TxDb from a GenBank record
make_gbrecord | GenBank object constructors
otherFeatures | Retrieve 'other' features
otherFeatures,GenBankRecord | Retrieve 'other' features
otherFeatures-method | Retrieve 'other' features
parseGenBank | Parse raw genbank file content
readGenBank | Read a GenBank File
seqinfo,GenBankRecord | Annotation extraction api
seqinfo-method | Annotation extraction api
sources | genbankr specific api
sources,GenBankRecord | genbankr specific api
sources-method | genbankr specific api
transcripts-method | Annotation extraction api
variants | Retrieve variantion features
variants,GenBankRecord | Retrieve variantion features
variants-method | Retrieve variantion features
vers | genbankr specific api
vers,GenBankRecord | genbankr specific api
vers-method | genbankr specific api