Package: uSORT
Title: uSORT: A self-refining ordering pipeline for gene selection
Version: 1.32.0
Author: Mai Chan Lau, Hao Chen, Jinmiao Chen
Description: This package is designed to uncover the intrinsic cell
        progression path from single-cell RNA-seq data. It incorporates
        data pre-processing, preliminary PCA gene selection,
        preliminary cell ordering, feature selection, refined cell
        ordering, and post-analysis interpretation and visualization.
Maintainer: Hao Chen <chen_hao@immunol.a-star.edu.sg>
biocViews: ImmunoOncology, RNASeq, GUI, CellBiology, DNASeq
Depends: R (>= 3.3.0), tcltk
VignetteBuilder: knitr
Suggests: knitr, RUnit, testthat, ggplot2
Imports: igraph, Matrix, RANN, RSpectra, VGAM, gplots, parallel, plyr,
        methods, cluster, Biobase, fpc, BiocGenerics, monocle,
        grDevices, graphics, stats, utils
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 5.0.1
git_url: https://git.bioconductor.org/packages/uSORT
git_branch: RELEASE_3_20
git_last_commit: 8111152
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-11-08
NeedsCompilation: no
Packaged: 2024-11-09 00:32:19 UTC; biocbuild
Built: R 4.4.1; ; 2024-11-09 22:16:59 UTC; unix
