chr.hash	chr.hash
correctCoverageBias	correctCoverageBias
createCurationFile	createCurationFile
createExonWeightFile	createExonWeightFile
createNormalDatabase	createNormalDatabase
createSNPBlacklist	createSNPBlacklist
filterVcfBasic	filterVcfBasic
filterVcfMuTect	filterVcfMuTect
findBestNormal	findBestNormal
findFocal	findFocal
getSexFromCoverage	getSexFromCoverage
plotAbs	plotAbs
plotBestNormal	plotBestNormal
poolCoverage	poolCoverage
predictSomatic	predictSomatic
purecn.example.output	purecn.example.output
readCoverageGatk	readCoverageGatk
readCurationFile	readCurationFile
runAbsoluteCN	runAbsoluteCN
segmentationCBS	segmentationCBS
segmentationPSCBS	segmentationPSCBS
setPriorVcf	setPriorVcf
